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Single-Cell Analysis of Human Pancreas Reveals Transcriptional Signatures of Aging and Somatic Mutation Patterns.

Citation
Enge, M., et al. “Single-Cell Analysis Of Human Pancreas Reveals Transcriptional Signatures Of Aging And Somatic Mutation Patterns.”. Cell, pp. 321-330.e14.
Center Vanderbilt University Stanford University
Multicenter
Multicenter
Author Martin Enge, Efsun Arda, Marco Mignardi, John Beausang, Rita Bottino, Seung K Kim, Stephen R Quake
Keywords glucagon, human aging, human pancreas, insulin, islet, mutational signatures, single-cell RNA-seq, somatic variation, transcriptional instability
Abstract

As organisms age, cells accumulate genetic and epigenetic errors that eventually lead to impaired organ function or catastrophic transformation such as cancer. Because aging reflects a stochastic process of increasing disorder, cells in an organ will be individually affected in different ways, thus rendering bulk analyses of postmitotic adult cells difficult to interpret. Here, we directly measure the effects of aging in human tissue by performing single-cell transcriptome analysis of 2,544 human pancreas cells from eight donors spanning six decades of life. We find that islet endocrine cells from older donors display increased levels of transcriptional noise and potential fate drift. By determining the mutational history of individual cells, we uncover a novel mutational signature in healthy aging endocrine cells. Our results demonstrate the feasibility of using single-cell RNA sequencing (RNA-seq) data from primary cells to derive insights into genetic and transcriptional processes that operate on aging human tissue.

Year of Publication
2017
Journal
Cell
Volume
171
Issue
2
Number of Pages
321-330.e14
Date Published
10/2017
ISSN Number
1097-4172
DOI
10.1016/j.cell.2017.09.004
Alternate Journal
Cell
PMID
28965763
PMCID
PMC6047899
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